C16orf7

Protein-coding gene in the species Homo sapiens
VPS9D1
Identifiers
AliasesVPS9D1, ATP-BL, C16orf7, VPS9 domain containing 1, ATPBL
External IDsMGI: 1914143; HomoloGene: 21021; GeneCards: VPS9D1; OMA:VPS9D1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for VPS9D1
Genomic location for VPS9D1
Band16q24.3Start89,707,134 bp[1]
End89,720,898 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for VPS9D1
Genomic location for VPS9D1
Band8|8 E1Start123,242,356 bp[2]
End123,254,348 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right frontal lobe

  • right hemisphere of cerebellum

  • anterior pituitary

  • granulocyte

  • apex of heart

  • anterior cingulate cortex

  • Brodmann area 9

  • left adrenal cortex

  • right lobe of liver

  • right adrenal gland
Top expressed in
  • saccule

  • granulocyte

  • otic vesicle

  • interventricular septum

  • visual cortex

  • primary visual cortex

  • superior frontal gyrus

  • otic placode

  • zygote

  • primary oocyte
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

9605

72325

Ensembl

ENSG00000075399

ENSMUSG00000001062

UniProt

Q9Y2B5

Q8C190

RefSeq (mRNA)

NM_004913

NM_028200
NM_001310661

RefSeq (protein)

NP_004904

NP_001297590
NP_082476

Location (UCSC)Chr 16: 89.71 – 89.72 MbChr 8: 123.24 – 123.25 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Chromosome 16 open reading frame 7 is a protein that in humans is encoded by the C16orf7 gene.[5][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000075399 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000001062 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: chromosome 16 open reading frame 7".
  6. ^ Sugimoto J, Hatakeyama T, Isobe M (February 1999). "Isolation and mapping of a putative b subunit of human ATP synthase (ATP-BL) from human leukocytes". DNA Res. 6 (1): 29–35. doi:10.1093/dnares/6.1.29. PMID 10231027.

Further reading

  • Choy KW, Wang CC, Ogura A, et al. (2006). "Genomic annotation of 15,809 ESTs identified from pooled early gestation human eyes". Physiol. Genomics. 25 (1): 9–15. doi:10.1152/physiolgenomics.00121.2005. PMID 16368877.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.


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