CFDP1

Protein-coding gene in the species Homo sapiens
CFDP1
Identifiers
AliasesCFDP1, BCNT, BUCENTAUR, CENP-29, CP27, SWC5, Yeti, p97, craniofacial development protein 1
External IDsOMIM: 608108; MGI: 1344403; HomoloGene: 4611; GeneCards: CFDP1; OMA:CFDP1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for CFDP1
Genomic location for CFDP1
Band16q23.1Start75,293,698 bp[1]
End75,433,503 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for CFDP1
Genomic location for CFDP1
Band8|8 E1Start111,768,491 bp[2]
End111,854,291 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • Achilles tendon

  • ventricular zone

  • epithelium of colon

  • mucosa of transverse colon

  • right testis

  • tendon of biceps brachii

  • sural nerve

  • jejunal mucosa

  • left testis
Top expressed in
  • otic placode

  • saccule

  • otic vesicle

  • condyle

  • fossa

  • genital tubercle

  • medullary collecting duct

  • maxillary prominence

  • primitive streak

  • superior cervical ganglion
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • molecular function
Cellular component
  • chromosome, centromeric region
  • kinetochore
  • chromosome
  • cellular component
Biological process
  • multicellular organism development
  • negative regulation of fibroblast apoptotic process
  • cell adhesion
  • regulation of cell population proliferation
  • regulation of cell shape
  • biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10428

23837

Ensembl

ENSG00000153774

ENSMUSG00000031954

UniProt

Q9UEE9

O88271

RefSeq (mRNA)

NM_006324

NM_011801

RefSeq (protein)

NP_006315

NP_035931
NP_001355264
NP_001355265
NP_001355266
NP_001355267

Location (UCSC)Chr 16: 75.29 – 75.43 MbChr 8: 111.77 – 111.85 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Craniofacial development protein 1 is a protein that in humans is encoded by the CFDP1 gene.[5][6][7][8]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000153774 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000031954 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Takahashi I, Nobukuni T, Ohmori H, Kobayashi M, Tanaka S, Ohshima K, Okada N, Masui T, Hashimoto K, Iwashita S (Jul 1998). "Existence of a bovine LINE repetitive insert that appears in the cDNA of bovine protein BCNT in ruminant, but not in human, genomes". Gene. 211 (2): 387–94. doi:10.1016/S0378-1119(98)00136-X. PMID 9602175.
  6. ^ Nobukuni T, Kobayashi M, Omori A, Ichinose S, Iwanaga T, Takahashi I, Hashimoto K, Hattori S, Kaibuchi K, Miyata Y, Masui T, Iwashita S (Mar 1997). "An Alu-linked repetitive sequence corresponding to 280 amino acids is expressed in a novel bovine protein, but not in its human homologue". J Biol Chem. 272 (5): 2801–7. doi:10.1074/jbc.272.5.2801. PMID 9006920.
  7. ^ Diekwisch TG, Luan X (May 2002). "CP27 function is necessary for cell survival and differentiation during tooth morphogenesis in organ culture". Gene. 287 (1–2): 141–7. doi:10.1016/S0378-1119(01)00868-X. PMID 11992732.
  8. ^ "Entrez Gene: CFDP1 craniofacial development protein 1".

Further reading

  • Iwashita S (2002). "[A novel type protein, Bcnt, that includes the region derived from a long interspersed nucleotide element]". Seikagaku. 73 (12): 1435–8. PMID 11831036.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Colland F, Jacq X, Trouplin V, et al. (2004). "Functional proteomics mapping of a human signaling pathway". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMC 442148. PMID 15231748.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Diekwisch TG, Marches F, Williams A, Luan X (1999). "Cloning, gene expression, and characterization of CP27, a novel gene in mouse embryogenesis". Gene. 235 (1–2): 19–30. doi:10.1016/S0378-1119(99)00220-6. PMID 10415329.
  • Iwashita S, Nobukuni T, Tanaka S, et al. (1999). "Partial nuclear localization of a bovine phosphoprotein, BCNT, that includes a region derived from a LINE repetitive sequence in Ruminantia". Biochim. Biophys. Acta. 1427 (3): 408–16. doi:10.1016/s0304-4165(99)00049-5. PMID 10350657.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.


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