CRLF1

Protein-coding gene in the species Homo sapiens

CRLF1
Identifiers
AliasesCRLF1, CISS, CISS1, CLF, CLF-1, NR6, zcytor5, cytokine receptor like factor 1
External IDsOMIM: 604237; MGI: 1340030; HomoloGene: 3489; GeneCards: CRLF1; OMA:CRLF1 - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for CRLF1
Genomic location for CRLF1
Band19p13.11Start18,572,220 bp[1]
End18,607,741 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for CRLF1
Genomic location for CRLF1
Band8 B3.3|8 34.15 cMStart70,945,808 bp[2]
End70,956,731 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right coronary artery

  • popliteal artery

  • tibial arteries

  • left coronary artery

  • thoracic aorta

  • ascending aorta

  • right lobe of thyroid gland

  • decidua

  • left lobe of thyroid gland

  • Descending thoracic aorta
Top expressed in
  • stroma of bone marrow

  • seminiferous tubule

  • corneal stroma

  • maxillary prominence

  • lower lip

  • submandibular gland

  • upper lip

  • hand

  • endothelial cell of lymphatic vessel

  • calvaria
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein heterodimerization activity
  • ciliary neurotrophic factor receptor binding
  • cytokine activity
  • protein binding
  • cytokine binding
  • cytokine receptor activity
Cellular component
  • extracellular region
  • CRLF-CLCF1 complex
  • extracellular space
  • cytosol
  • external side of plasma membrane
  • receptor complex
Biological process
  • negative regulation of neuron apoptotic process
  • ureteric bud development
  • positive regulation of cell population proliferation
  • negative regulation of motor neuron apoptotic process
  • positive regulation of tyrosine phosphorylation of STAT protein
  • regulation of signaling receptor activity
  • cytokine-mediated signaling pathway
  • interleukin-27-mediated signaling pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9244

12931

Ensembl

ENSG00000006016

ENSMUSG00000007888

UniProt

O75462

Q9JM58

RefSeq (mRNA)

NM_004750

NM_018827
NM_001378799
NM_001378800
NM_001378801
NM_001378802

NM_001378803

RefSeq (protein)

NP_004741

NP_061297
NP_001365728
NP_001365729
NP_001365730
NP_001365731

NP_001365732

Location (UCSC)Chr 19: 18.57 – 18.61 MbChr 8: 70.95 – 70.96 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cytokine receptor-like factor 1 is a protein that in humans is encoded by the CRLF1 gene.[5][6]

Function

This gene encodes a member of the cytokine type I receptor family. The protein forms a secreted complex with cardiotrophin-like cytokine factor 1 and acts on cells expressing ciliary neurotrophic factor receptors. The complex can promote survival of neuronal cells.[6]

Clinical significance

Mutations in this gene are associated with two conditions, both rare:

  • Cold-induced sweating syndrome, characterized by profuse hyperhidrosis in cold environmental temperature and characteristic craniofacial and skeletal features)[7][8]
  • Crisponi syndrome (CS), characterized by neonatal-onset paroxysmal muscular contractions, abnormal function of the autonomic nervous system and craniofacial and skeletal manifestations such as thick and arched eyebrows, a short nose with anteverted nostrils, full cheeks, an inverted upper lip and a small mouth.[7]

It is unknown whether the two conditions are distinct clinical entities or a single clinical entity with variable expressions.[7] Other characteristic features in CRLF1 mutation include marfanoid habitus with progressive kyphoscoliosis and craniofacial characteristics including dolichocephaly, a slender face with poor expression, a nose with hypoplastic nares, malar hypoplasia and prognathism.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000006016 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000007888 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Elson GC, Graber P, Losberger C, Herren S, Gretener D, Menoud LN, Wells TN, Kosco-Vilbois MH, Gauchat JF (Aug 1998). "Cytokine-like factor-1, a novel soluble protein, shares homology with members of the cytokine type I receptor family". J Immunol. 161 (3): 1371–9. doi:10.4049/jimmunol.161.3.1371. PMID 9686600.
  6. ^ a b "Entrez Gene: CRLF1 cytokine receptor-like factor 1".
  7. ^ a b c d Yamazaki M, Kosho T, Kawachi S, Mikoshiba M, Takahashi J, Sano R, Oka K, Yoshida K, Watanabe T, Kato H, Komatsu M, Kawamura R, Wakui K, Knappskog PM, Boman H, Fukushima Y (March 2010). "Cold-induced sweating syndrome with neonatal features of Crisponi syndrome: longitudinal observation of a patient homozygous for a CRLF1 mutation". Am. J. Med. Genet. A. 152A (3): 764–9. doi:10.1002/ajmg.a.33315. PMID 20186812. S2CID 19694775.
  8. ^ Rousseau F, Gauchat JF, McLeod JG, Chevalier S, Guillet C, Guilhot F, Cognet I, Froger J, Hahn AF, Knappskog PM, Gascan H, Boman H (June 2006). "Inactivation of cardiotrophin-like cytokine, a second ligand for ciliary neurotrophic factor receptor, leads to cold-induced sweating syndrome in a patient". Proc. Natl. Acad. Sci. U.S.A. 103 (26): 10068–73. Bibcode:2006PNAS..10310068R. doi:10.1073/pnas.0509598103. PMC 1502507. PMID 16782820.

Further reading

  • Elson GC, Lelièvre E, Guillet C, et al. (2000). "CLF associates with CLC to form a functional heteromeric ligand for the CNTF receptor complex". Nat. Neurosci. 3 (9): 867–72. doi:10.1038/78765. PMID 10966616. S2CID 25766998.
  • Lelièvre E, Plun-Favreau H, Chevalier S, et al. (2001). "Signaling pathways recruited by the cardiotrophin-like cytokine/cytokine-like factor-1 composite cytokine: specific requirement of the membrane-bound form of ciliary neurotrophic factor receptor alpha component". J. Biol. Chem. 276 (25): 22476–84. doi:10.1074/jbc.M101681200. PMID 11294841.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Knappskog PM, Majewski J, Livneh A, et al. (2003). "Cold-induced sweating syndrome is caused by mutations in the CRLF1 gene". Am. J. Hum. Genet. 72 (2): 375–83. doi:10.1086/346120. PMC 379230. PMID 12509788.
  • Clark HF, Gurney AL, Abaya E, et al. (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697. PMID 12975309.
  • Heese K, Yamada T, Akatsu H, et al. (2005). "Characterizing the new transcription regulator protein p60TRP". J. Cell. Biochem. 91 (5): 1030–42. doi:10.1002/jcb.20010. PMID 15034937. S2CID 28107229.
  • Zhang Z, Henzel WJ (2005). "Signal peptide prediction based on analysis of experimentally verified cleavage sites". Protein Sci. 13 (10): 2819–24. doi:10.1110/ps.04682504. PMC 2286551. PMID 15340161.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Dagoneau N, Bellais S, Blanchet P, et al. (2007). "Mutations in cytokine receptor-like factor 1 (CRLF1) account for both Crisponi and cold-induced sweating syndromes". Am. J. Hum. Genet. 80 (5): 966–70. doi:10.1086/513608. PMC 1852726. PMID 17436251.
  • Crisponi L, Crisponi G, Meloni A, et al. (2007). "Crisponi syndrome is caused by mutations in the CRLF1 gene and is allelic to cold-induced sweating syndrome type 1". Am. J. Hum. Genet. 80 (5): 971–81. doi:10.1086/516843. PMC 1852730. PMID 17436252.
  • Hahn, Angelika F. Knappskog, Per Morten (March 3, 2011 [Updated August 12, 2021]). "Cold-Induced Sweating Syndrome Including Crisponi Syndrome". GeneReviews.
  • "Search: '601559 193700 601680 272430 601378 604237 607672 610313 272430 601378 604237 607672 610313 (Search in: MIM number)'". Online Mendelian Inheritance in Man entries about cold-induced sweating syndrome including Crisponi syndrome.
  • Human CRLF1 genome location and CRLF1 gene details page in the UCSC Genome Browser.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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