Christoph Steinbeck
- Chemistry Development Kit
- Journal of Cheminformatics
- JChemPaint
- ChEBI
- Cheminformatics
- Bioinformatics
- Metabolism[2]
- Friedrich-Schiller-Universität Jena
- EMBL-EBI
- Tufts University
- Max Planck Institute for Chemical Ecology[citation needed]
- Cologne University[citation needed]
- University of Bonn
Christoph Steinbeck (born 1966 in Neuwied[3]) is a German chemist and has a professorship for analytical chemistry, cheminformatics and chemometrics at the Friedrich-Schiller-Universität Jena in Thuringia.[4][5]
Education
Steinbeck received his PhD from the University of Bonn[6] in 1995 for work on LUCY, a software program for structural elucidation from nuclear magnetic resonance (NMR) correlation experiments.[7] In 2003 he received his habilitation.[8]
Research
Steinbeck's research interests[2][9][10][11] have involved the elucidation of chemical structures of metabolites. He was one of the first chemists to develop open source tools for cheminformatics. He initiated JChemPaint,[12] was founder of the Chemistry Development Kit,[13][14] and is responsible for leading the team working on Chemical Entities of Biological Interest (ChEBI).[15][16][17][18] He headed the Cheminformatics and Metabolomics group at the European Molecular Biology Laboratory-European Bioinformatics Institute in Cambridge, United Kingdom from 2008 to 2016. He became a professor for analytical chemistry, cheminformatics and chemometrics at the Friedrich-Schiller-Universität Jena in Thuringia, Germany in March 2017. Since 2020, Steinbeck is leading the German National Research Data Infrastructure for Chemistry (NFDI4Chem)[19] and in August 2022, he became vice President for digitalisation of the Friedrich Schiller University.[20] Together with a few other chemists he was a founder member of the Blue Obelisk[21][22] movement in 2005.[23]
Steinbeck was past editor-in-chief of the Journal of Cheminformatics, past director of the Metabolomics Society,[24] past chair of the Computers-Information-Chemistry division of the German Chemical Society, past trustee of the Chemical Structure Association Trust,[25] and a lifetime member of the World Association of Theoretically Oriented Chemists.[26]
References
![](http://upload.wikimedia.org/wikipedia/commons/thumb/3/32/Scholia_logo.svg/40px-Scholia_logo.svg.png)
- ^ Murray-Rust, P. Blue Obelisk Award – Christoph Steinbeck of CDK. http://blogs.ch.cam.ac.uk/pmr/2006/09/14/blue-obelisk-award-christoph-steinbeck-of-cdk/
- ^ a b Christoph Steinbeck publications indexed by Google Scholar
- ^ https://jungforscher-thueringen.de/wp-content/uploads/2019/03/20190620_22_SchuleMITWissenschaftThüringen.pdf [bare URL PDF]
- ^ Rafael Alcántara; Joseph Onwubiko; Hong Cao; et al. (21 November 2012). "The EBI enzyme portal". Nucleic Acids Research. 41 (Database issue): D773-80. doi:10.1093/NAR/GKS1112. ISSN 0305-1048. PMC 3531056. PMID 23175605. Wikidata Q34313323.
- ^ Sandra Orchard; Bissan Al-Lazikani; Steve Bryant; et al. (31 August 2011). "Minimum information about a bioactive entity (MIABE)". Nature Reviews Drug Discovery. 10 (9): 661–669. doi:10.1038/NRD3503. ISSN 1474-1776. PMID 21878981. Wikidata Q34212022.
- ^ Steinbeck, Christoph (1995). LUCY, ein Programm zur Konstitutionsbestimmung aus Korrelations-NMR-Experimenten sowie Beispiele zur Identifizierung von Naturstoffen durch NMR-Spektroskopie (PhD thesis). University of Bonn. DNB-IDN 948048905.
- ^ Christoph Steinbeck (20 September 1996). "LUCY—A Program for Structure Elucidation from NMR Correlation Experiments". Angewandte Chemie International Edition. 35 (17): 1984–1986. doi:10.1002/ANIE.199619841. ISSN 1433-7851. Wikidata Q50368945.
- ^ Steinbeck, Christoph (2003). Zur automatischen Strukturaufklärung organischer Verbindungen (Habilitation thesis). University of Bonn. DNB-IDN 970193602.
- ^ Christoph Steinbeck publications indexed by Microsoft Academic
- ^ Christoph Steinbeck at DBLP Bibliography Server
- ^ Christoph Steinbeck's publications indexed by the Scopus bibliographic database. (subscription required)
- ^ Krause, S.; Willighagen, E.; Steinbeck, C. (2000). "JChemPaint – Using the Collaborative Forces of the Internet to Develop a Free Editor for 2D Chemical Structures". Molecules. 5 (12): 93–98. doi:10.3390/50100093. hdl:11858/00-001M-0000-0012-A15A-4.
- ^ Steinbeck, C.; Han, Y.; Kuhn, S.; Horlacher, O.; Luttmann, E.; Willighagen, E. (2003). "The Chemistry Development Kit (CDK): An Open-Source Java Library for Chemo- and Bioinformatics". Journal of Chemical Information and Modeling. 43 (2): 493–500. doi:10.1021/ci025584y. PMC 4901983. PMID 12653513.
- ^ Steinbeck, C.; Hoppe, C.; Kuhn, S.; Floris, M.; Guha, R.; Willighagen, E. (2006). "Recent Developments of the Chemistry Development Kit (CDK) - an Open-Source Java Library for Chemo- and Bioinformatics" (PDF). Current Pharmaceutical Design. 12 (17): 2111–2120. doi:10.2174/138161206777585274. hdl:2066/35445. PMID 16796559.
- ^ Hastings, J.; De Matos, P.; Dekker, A.; Ennis, M.; Harsha, B.; Kale, N.; Muthukrishnan, V.; Owen, G.; Turner, S.; Williams, M.; Steinbeck, C. (2012). "The ChEBI reference database and ontology for biologically relevant chemistry: Enhancements for 2013". Nucleic Acids Research. 41 (Database issue): D456–D463. doi:10.1093/nar/gks1146. PMC 3531142. PMID 23180789.
- ^ Matos, P.; Adams, N.; Hastings, J.; Moreno, P.; Steinbeck, C. (2012). "A Database for Chemical Proteomics: ChEBI". Chemical Proteomics. Methods in Molecular Biology. Vol. 803. pp. 273–296. doi:10.1007/978-1-61779-364-6_19. ISBN 978-1-61779-363-9. PMID 22065232.
- ^ Degtyarenko, K.; Hastings, J.; De Matos, P.; Ennis, M. (2009). "ChEBI: An Open Bioinformatics and Cheminformatics Resource". In Andreas D. Baxevanis (ed.). Current Protocols in Bioinformatics. Vol. 14. pp. 14.9.1–14.9.20. doi:10.1002/0471250953.bi1409s26. ISBN 978-0471250951. PMID 19496059. S2CID 20115758.
- ^ Degtyarenko, K.; De Matos, P.; Ennis, M.; Hastings, J.; Zbinden, M.; McNaught, A.; Alcantara, R.; Darsow, M.; Guedj, M.; Ashburner, M. (2007). "ChEBI: A database and ontology for chemical entities of biological interest". Nucleic Acids Research. 36 (Database issue): D344–D350. doi:10.1093/nar/gkm791. PMC 2238832. PMID 17932057.
- ^ "Our Consortium". NFDI4Chem. Retrieved 6 March 2023.
- ^ "The University of Jena establishes a new Vice President for Digitalisation". Friedrich Schiller University Jena. 19 July 2022. Retrieved 6 March 2023.
- ^ O'Boyle, N. M.; Guha, R.; Willighagen, E. L.; Adams, S. E.; Alvarsson, J.; Bradley, J. C.; Filippov, I. V.; Hanson, R. M.; Hanwell, M. D.; Hutchison, G. R.; James, C. A.; Jeliazkova, N.; Lang, A. S. D.; Langner, K. M.; Lonie, D. C.; Lowe, D. M.; Pansanel, J. R. M.; Pavlov, D.; Spjuth, O.; Steinbeck, C.; Tenderholt, A. L.; Theisen, K. J.; Murray-Rust, P. (2011). "Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on". Journal of Cheminformatics. 3 (1): 37. doi:10.1186/1758-2946-3-37. PMC 3205042. PMID 21999342.
- ^ Guha, R.; Howard, M. T.; Hutchison, G. R.; Murray-Rust, P.; Rzepa, H.; Steinbeck, C.; Wegner, J.; Willighagen, E. L. (2006). "The Blue Obelisk - Interoperability in Chemical Informatics". Journal of Chemical Information and Modeling. 46 (3): 991–998. doi:10.1021/ci050400b. PMC 4878861. PMID 16711717.
- ^ Guha, R.; Howard, M. T.; Hutchison, G. R.; Murray-Rust, P.; Rzepa, H.; Steinbeck, C.; Wegner, J.; Willighagen, E. L. (2006). "The Blue Obelisk - Interoperability in Chemical Informatics". Journal of Chemical Information and Modeling. 46 (3): 991–998. doi:10.1021/ci050400b. PMC 4878861. PMID 16711717.
- ^ Metabolomics Society Board Archived 23 March 2014 at the Wayback Machine, website of Metabolomics Society
- ^ Chemical Structure Association Newsletter, 2006, 12, http://www.csa-trust.org/news06/Issue12.pdf Archived 26 March 2016 at the Wayback Machine
- ^ "WATOC – Home". www.watoc.net. Retrieved 19 December 2021.
External links
- www
.steinbeck-molecular .de