NIP30

Protein-coding gene in the species Homo sapiens
PSME3IP1
Identifiers
AliasesPSME3IP1, C16orf94, CDA018, NIP30, CDA10, family with sequence similarity 192 member A, PIP30, FAM192A, proteasome activator subunit 3 interacting protein 1
External IDsOMIM: 617766; MGI: 1919637; HomoloGene: 11797; GeneCards: PSME3IP1; OMA:PSME3IP1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for PSME3IP1
Genomic location for PSME3IP1
Band16q13Start57,152,466 bp[1]
End57,186,116 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for PSME3IP1
Genomic location for PSME3IP1
Band8|8 C5Start95,300,766 bp[2]
End95,328,625 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • monocyte

  • granulocyte

  • right uterine tube

  • left testis

  • ganglionic eminence

  • rectum

  • right testis

  • sural nerve

  • transverse colon
Top expressed in
  • zygote

  • tail of embryo

  • Ileal epithelium

  • ventricular zone

  • primary oocyte

  • medial ganglionic eminence

  • neural layer of retina

  • genital tubercle

  • epiblast

  • neural tube
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
Cellular component
  • nucleus
Biological process
  • negative regulation of protein binding
  • negative regulation of proteasomal protein catabolic process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

80011

102122

Ensembl

ENSG00000172775

ENSMUSG00000031774

UniProt

Q9GZU8

Q91WE2

RefSeq (mRNA)
NM_024946
NM_001354078
NM_001354079
NM_001354080
NM_001354081

NM_001354082
NM_001354083
NM_001354084
NM_001354085
NM_001354086
NM_001354088
NM_001354090
NM_001354091
NM_001354092
NM_001354094
NM_001354097
NM_001354098
NM_001354099
NM_001354100
NM_001354087
NM_001354089
NM_001354095
NM_001354096
NM_001354101
NM_001354102
NM_001354103

NM_028221
NM_001363456
NM_001363457

RefSeq (protein)
NP_079222
NP_001341007
NP_001341008
NP_001341009
NP_001341010

NP_001341011
NP_001341012
NP_001341013
NP_001341014
NP_001341015
NP_001341017
NP_001341019
NP_001341020
NP_001341021
NP_001341023
NP_001341026
NP_001341027
NP_001341028
NP_001341029
NP_001341016
NP_001341018
NP_001341024
NP_001341025
NP_001341030
NP_001341031
NP_001341032

NP_082497
NP_001350385
NP_001350386

Location (UCSC)Chr 16: 57.15 – 57.19 MbChr 8: 95.3 – 95.33 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

NIP30 protein is a protein that in humans is encoded by the FAM192A gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000172775 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000031774 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA (Dec 2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc Natl Acad Sci U S A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  6. ^ "Entrez Gene: NIP30 NEFA-interacting nuclear protein NIP30".

Further reading

  • Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


  • v
  • t
  • e