PMFBP1

Protein-coding gene in the species Homo sapiens
PMFBP1
Identifiers
AliasesPMFBP1, polyamine modulated factor 1 binding protein 1, STAP, SPGF31
External IDsOMIM: 618085; MGI: 1930136; HomoloGene: 23182; GeneCards: PMFBP1; OMA:PMFBP1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for PMFBP1
Genomic location for PMFBP1
Band16q22.2Start72,112,157 bp[1]
End72,176,878 bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for PMFBP1
Genomic location for PMFBP1
Band8 D3|8 57.05 cMStart110,220,659 bp[2]
End110,269,272 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sperm

  • right testis

  • left testis

  • testicle

  • gonad

  • tail of epididymis

  • mucosa of transverse colon

  • apex of heart

  • body of pancreas

  • granulocyte
Top expressed in
  • seminiferous tubule

  • spermatid

  • lumbar spinal ganglion

  • spermatocyte

  • morula

  • embryo

  • secondary oocyte

  • zygote

  • primary oocyte

  • tibiofemoral joint
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • molecular function
Cellular component
  • cytoplasm
  • cilium
  • motile cilium
  • cell projection
  • sperm connecting piece
Biological process
  • biological process
  • spermatogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

83449

56523

Ensembl

ENSG00000118557

ENSMUSG00000031727

UniProt

Q8TBY8

Q9WVQ0

RefSeq (mRNA)

NM_001160213
NM_031293

NM_019938

RefSeq (protein)

NP_001153685
NP_112583

NP_064322

Location (UCSC)Chr 16: 72.11 – 72.18 MbChr 8: 110.22 – 110.27 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Polyamine-modulated factor 1-binding protein 1 is a protein that is encoded in humans by the PMFBP1 gene.[5][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000118557 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000031727 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ohuchi J, Arai T, Kon Y, Asano A, Yamauchi H, Watanabe T (Jul 2001). "Characterization of a novel gene, sperm-tail-associated protein (Stap), in mouse post-meiotic testicular germ cells". Mol Reprod Dev. 59 (4): 350–8. doi:10.1002/mrd.1041. PMID 11468771. S2CID 23623069.
  6. ^ "Entrez Gene: PMFBP1 polyamine modulated factor 1 binding protein 1".

Further reading

  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Loftus BJ, Kim UJ, Sneddon VP, et al. (1999). "Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q". Genomics. 60 (3): 295–308. doi:10.1006/geno.1999.5927. PMID 10493829.


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