TBC1D24

Protein-coding gene in the species Homo sapiens
TBC1D24
Identifiers
AliasesTBC1D24, DFNA65, DFNB86, DOORS, EIEE16, FIME, TLDC6, TBC1 domain family member 24, EPRPDC, DEE16
External IDsOMIM: 613577; MGI: 2443456; HomoloGene: 27469; GeneCards: TBC1D24; OMA:TBC1D24 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for TBC1D24
Genomic location for TBC1D24
Band16p13.3Start2,475,051 bp[1]
End2,509,560 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for TBC1D24
Genomic location for TBC1D24
Band17|17 A3.3Start24,394,405 bp[2]
End24,424,536 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • parotid gland

  • Brodmann area 23

  • middle temporal gyrus

  • corpus epididymis

  • cerebellar vermis

  • renal medulla

  • superior frontal gyrus

  • entorhinal cortex

  • Brodmann area 46

  • cerebellar hemisphere
Top expressed in
  • retinal pigment epithelium

  • barrel cortex

  • ciliary body

  • substantia nigra

  • iris

  • prefrontal cortex

  • neural layer of retina

  • nucleus accumbens

  • suprachiasmatic nucleus

  • temporal lobe
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • GTPase activator activity
Cellular component
  • cytoplasm
  • terminal bouton
  • neuromuscular junction
  • plasma membrane
  • cell junction
  • membrane
  • cytoplasmic vesicle membrane
  • cytoplasmic vesicle
Biological process
  • regulation of cilium assembly
  • positive regulation of GTPase activity
  • neuron projection development
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57465

224617

Ensembl

ENSG00000162065

ENSMUSG00000036473

UniProt

Q9ULP9

Q3UUG6

RefSeq (mRNA)

NM_020705
NM_001199107

NM_001163847
NM_001163848
NM_001163849
NM_001163850
NM_001163851

NM_001163852
NM_001163853
NM_173186

RefSeq (protein)

NP_001186036
NP_065756

NP_001157319
NP_001157320
NP_001157321
NP_001157322
NP_001157323

NP_001157324
NP_001157325
NP_775278

Location (UCSC)Chr 16: 2.48 – 2.51 MbChr 17: 24.39 – 24.42 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TBC1 domain family, member 24 is a protein that in humans is encoded by the TBC1D24 gene.[5]

Function

This gene encodes a protein with a conserved domain, referred to as the TBC domain, characteristic of proteins which interact with GTPases. TBC domain proteins may serve as GTPase-activating proteins for a particular group of GTPases, the Rab (Ras-related proteins in brain) small GTPases which are involved in the regulation of membrane trafficking. Mutations in this gene are associated with familial infantile myoclonic epilepsy. Alternative splicing results in multiple transcript variants.

Mutations in TBC1D24 cause Hereditary hearing loss.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000162065 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036473 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: TBC1 domain family, member 24".
  6. ^ Azaiez H, Booth KT, Bu F, Huygen P, Shibata SB, Shearer AE, Kolbe D, Meyer N, Black-Ziegelbein EA, Smith RJ (July 2014). "TBC1D24 mutation causes autosomal-dominant nonsyndromic hearing loss". Human Mutation. 35 (7): 819–23. doi:10.1002/humu.22557. PMC 4267685. PMID 24729539.

Further reading

  • Hirosawa M, Nagase T, Ishikawa K, Kikuno R, Nomura N, Ohara O (October 1999). "Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain". DNA Research. 6 (5): 329–36. doi:10.1093/dnares/6.5.329. PMID 10574461.
  • Fukuda M (June 2011). "TBC proteins: GAPs for mammalian small GTPase Rab?". Bioscience Reports. 31 (3): 159–68. doi:10.1042/BSR20100112. PMID 21250943.
  • Corbett MA, Bahlo M, Jolly L, Afawi Z, Gardner AE, Oliver KL, Tan S, Coffey A, Mulley JC, Dibbens LM, Simri W, Shalata A, Kivity S, Jackson GD, Berkovic SF, Gecz J (September 2010). "A focal epilepsy and intellectual disability syndrome is due to a mutation in TBC1D24". American Journal of Human Genetics. 87 (3): 371–5. doi:10.1016/j.ajhg.2010.08.001. PMC 2933342. PMID 20797691.
  • Ishibashi K, Kanno E, Itoh T, Fukuda M (January 2009). "Identification and characterization of a novel Tre-2/Bub2/Cdc16 (TBC) protein that possesses Rab3A-GAP activity". Genes to Cells. 14 (1): 41–52. doi:10.1111/j.1365-2443.2008.01251.x. PMID 19077034. S2CID 26454981.
  • Falace A, Filipello F, La Padula V, Vanni N, Madia F, De Pietri Tonelli D, de Falco FA, Striano P, Dagna Bricarelli F, Minetti C, Benfenati F, Fassio A, Zara F (September 2010). "TBC1D24, an ARF6-interacting protein, is mutated in familial infantile myoclonic epilepsy". American Journal of Human Genetics. 87 (3): 365–70. doi:10.1016/j.ajhg.2010.07.020. PMC 2933335. PMID 20727515.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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