TBCB

Protein-coding gene in the species Homo sapiens
TBCB
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1V6E, 1WHG

Identifiers
AliasesTBCB, CG22, CKAP1, CKAPI, tubulin folding cofactor B
External IDsOMIM: 601303; MGI: 1913661; HomoloGene: 981; GeneCards: TBCB; OMA:TBCB - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for TBCB
Genomic location for TBCB
Band19q13.12Start36,114,289 bp[1]
End36,125,947 bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for TBCB
Genomic location for TBCB
Band7|7 B1Start29,923,556 bp[2]
End29,931,697 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • C1 segment

  • inferior ganglion of vagus nerve

  • pons

  • prefrontal cortex

  • middle frontal gyrus

  • inferior olivary nucleus

  • hypothalamus

  • substantia nigra

  • superior vestibular nucleus

  • thalamus
Top expressed in
  • facial motor nucleus

  • epithelium of lens

  • barrel cortex

  • anterior horn of spinal cord

  • superior cervical ganglion

  • motor neuron

  • medial ganglionic eminence

  • medullary collecting duct

  • maxillary prominence

  • mandibular prominence
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • protein binding
Cellular component
  • cytoplasm
  • microtubule cytoskeleton
  • microtubule
  • cytoskeleton
  • cytosol
Biological process
  • multicellular organism development
  • cell differentiation
  • nervous system development
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1155

66411

Ensembl

ENSG00000105254

ENSMUSG00000006095

UniProt

Q99426

Q9D1E6

RefSeq (mRNA)

NM_001300971
NM_001281

NM_025548
NM_001360648
NM_001360649

RefSeq (protein)

NP_001272
NP_001287900

NP_079824
NP_001347577
NP_001347578

Location (UCSC)Chr 19: 36.11 – 36.13 MbChr 7: 29.92 – 29.93 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Tubulin-folding cofactor B is a protein that in humans is encoded by the TBCB gene.[5][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000105254 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000006095 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Watanabe TK, Shimizu F, Nagata M, Kawai A, Fujiwara T, Nakamura Y, Takahashi E, Hirai Y (Jan 1997). "Cloning, expression, and mapping of CKAPI, which encodes a putative cytoskeleton-associated protein containing a CAP-GLY domain". Cytogenet Cell Genet. 72 (2–3): 208–11. doi:10.1159/000134191. PMID 8978778.
  6. ^ "Entrez Gene: TBCB tubulin folding cofactor B".

Further reading

  • Wolz W, Wendelmuth U, Rouquier S, et al. (1997). "A complex satellite DNA polymorphism flanking the human ryanodine receptor gene (RYR1)". Cytogenet. Cell Genet. 72 (2–3): 215–6. doi:10.1159/000134193. PMID 8978780.
  • Tian G, Lewis SA, Feierbach B, et al. (1997). "Tubulin subunits exist in an activated conformational state generated and maintained by protein cofactors". J. Cell Biol. 138 (4): 821–32. doi:10.1083/jcb.138.4.821. PMC 2138046. PMID 9265649.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Grimwood J, Gordon LA, Olsen A, et al. (2004). "The DNA sequence and biology of human chromosome 19". Nature. 428 (6982): 529–35. Bibcode:2004Natur.428..529G. doi:10.1038/nature02399. PMID 15057824.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Rush J, Moritz A, Lee KA, et al. (2005). "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells". Nat. Biotechnol. 23 (1): 94–101. doi:10.1038/nbt1046. PMID 15592455. S2CID 7200157.
  • Vadlamudi RK, Barnes CJ, Rayala S, et al. (2005). "p21-activated kinase 1 regulates microtubule dynamics by phosphorylating tubulin cofactor B". Mol. Cell. Biol. 25 (9): 3726–36. doi:10.1128/MCB.25.9.3726-3736.2005. PMC 1084301. PMID 15831477.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Wang W, Ding J, Allen E, et al. (2006). "Gigaxonin interacts with tubulin folding cofactor B and controls its degradation through the ubiquitin-proteasome pathway". Curr. Biol. 15 (22): 2050–5. doi:10.1016/j.cub.2005.10.052. PMID 16303566.
  • Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569.
  • v
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  • 1v6e: Solution Structure of a N-terminal Ubiquitin-like Domain in Mouse Tubulin-specific Chaperone B
    1v6e: Solution Structure of a N-terminal Ubiquitin-like Domain in Mouse Tubulin-specific Chaperone B


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