Protein-coding gene in the species Homo sapiens
ZNF160 |
---|
|
Identifiers |
---|
Aliases | ZNF160, F11, HKr18, HZF5, KR18, zinc finger protein 160 |
---|
External IDs | OMIM: 600398; HomoloGene: 131121; GeneCards: ZNF160; OMA:ZNF160 - orthologs |
---|
Gene location (Human) |
---|
![Chromosome 19 (human)](//upload.wikimedia.org/wikipedia/commons/thumb/5/54/Ideogram_human_chromosome_19.svg/300px-Ideogram_human_chromosome_19.svg.png) | Chr. | Chromosome 19 (human)[1] |
---|
| Band | 19q13.41-q13.42 | Start | 53,066,606 bp[1] |
---|
End | 53,103,434 bp[1] |
---|
|
RNA expression pattern |
---|
Bgee | Human | Mouse (ortholog) |
---|
Top expressed in | - renal medulla
- endothelial cell
- pylorus
- nipple
- ventral tegmental area
- visceral pleura
- cardia
- sperm
- superior surface of tongue
- trigeminal ganglion
|
| | More reference expression data |
|
---|
BioGPS | ![](//upload.wikimedia.org/wikipedia/commons/thumb/1/1f/PBB_GE_ZNF160_214715_x_at_fs.png/250px-PBB_GE_ZNF160_214715_x_at_fs.png) | More reference expression data |
|
---|
|
Gene ontology |
---|
Molecular function | - DNA binding
- metal ion binding
- nucleic acid binding
- DNA-binding transcription factor activity, RNA polymerase II-specific
| Cellular component | - intracellular anatomical structure
- nucleus
| Biological process | - regulation of transcription, DNA-templated
- transcription, DNA-templated
- regulation of transcription by RNA polymerase II
- hemopoiesis
| Sources:Amigo / QuickGO |
|
Orthologs |
---|
Species | Human | Mouse |
---|
Entrez | | |
---|
Ensembl | | |
---|
UniProt | | |
---|
RefSeq (mRNA) | NM_001102603 NM_033288 NM_198893 NM_001322125 NM_001322126
|
---|
NM_001322128 NM_001322129 NM_001322130 NM_001322131 NM_001322132 NM_001322133 NM_001322134 NM_001322135 NM_001322136 NM_001322137 NM_001322138 NM_001322139 |
| |
---|
RefSeq (protein) | NP_001096073 NP_001309054 NP_001309055 NP_001309057 NP_001309058
|
---|
NP_001309059 NP_001309060 NP_001309061 NP_001309062 NP_001309063 NP_001309064 NP_001309065 NP_001309066 NP_001309067 NP_001309068 NP_150630 NP_942596 |
| |
---|
Location (UCSC) | Chr 19: 53.07 – 53.1 Mb | n/a |
---|
PubMed search | [2] | n/a |
---|
|
Wikidata |
|
Zinc finger protein 160 is a protein that, in humans, is encoded by the ZNF160 gene.[3][4][5]
The protein encoded by this gene is a Krüppel-related zinc finger protein which is characterized by the presence of an N-terminal repressor domain, the Kruppel-associated box (KRAB). The KRAB domain is a potent repressor of transcription; thus this protein may function in transcription regulation. Two alternative transcripts encoding the same isoform have been described.[5]
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000170949 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ Halford S, Mattei MG, Daw S, Scambler PJ (Jul 1995). "A novel C2H2 zinc-finger protein gene (ZNF160) maps to human chromosome 19q13.3-q13.4". Genomics. 25 (1): 322–3. doi:10.1016/0888-7543(95)80149-G. PMID 7774943.
- ^ Abrink M, Aveskogh M, Hellman L (Mar 1995). "Isolation of cDNA clones for 42 different Kruppel-related zinc finger proteins expressed in the human monoblast cell line U-937". DNA Cell Biol. 14 (2): 125–36. doi:10.1089/dna.1995.14.125. PMID 7865130.
- ^ a b "Entrez Gene: ZNF160 zinc finger protein 160".
Further reading
- Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
- Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Mark C, Looman C, Abrink M, Hellman L (2001). "Molecular cloning and preliminary functional analysis of two novel human KRAB zinc finger proteins, HKr18 and HKr19". DNA Cell Biol. 20 (5): 275–86. doi:10.1089/104454901750232472. PMID 11410164.
- Hattori A, Okumura K, Nagase T, et al. (2001). "Characterization of long cDNA clones from human adult spleen". DNA Res. 7 (6): 357–66. doi:10.1093/dnares/7.6.357. PMID 11214971.
- Nagase T, Kikuno R, Nakayama M, et al. (2001). "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (4): 273–81. doi:10.1093/dnares/7.4.271. PMID 10997877.